Medaka

https://github.com/nanoporetech/medaka

Automatic Build

Inside ${HOME}/bioit/apps/medaka/SPEC there is a script called build. This just requires the version number and will download, compile, install and create the modulefile for you. Execute it as follows:

${HOME}/bioit/apps/medaka/SPEC/build 2.1.0

When that completes check that the new version is available using:

module avail medaka

If that shows as being there you can test it works with:

module load medaka/2.1.0
which medaka
medaka --version